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Introduction

Welcome to this book An eBook on Practical Bioinformatics. Here, you will find information on topics of Bioinformatics for applications in the field of Biomedical Sciences. This book is used as a teaching material for the Bioinformatics course in 2nd Bachelor of Biomedical Sciences at KU Leuven.

A pdf version of this book is available at: An eBook on Practical Bioinformatics: PDF

An epub version of this book is available at: An eBook on Practical Bioinformatics: ePub

The source code of this book is available at: An eBook on Practical Bioinformatics: Source Code

Overview of content

Theory


Chapter 1. Biological databases: structure, data retrieval and formats

Chapter 2. Introduction to Linux

Chapter 3. Introduction to Python

Chapter 4. Gene predictions

Chapter 5. CpG island predictions

Chapter 6. Alignments

Chapter 7. Gene lists

Chapter 8. Pattern matching

Optional reading

Exercises


Exercises Biological databases

Exercises Linux

Exercises Python

Exercises Gene predictions

Exercises Alignments

Exercises Gene lists

Exercises Pattern matching

Acknowledgements and contributions

Special thanks to Heleen Masset (heleen.masset@student.kuleuven.be) for writing and creating this book, Mark Fiers (Mark.Fiers@cme.vib-kuleuven.be) and Bram Van de Sande for providing the content on the introduction to Python.

Contact

Corrections or suggestions for the improvement of this book are welcome at stein.aerts@med.kuleuven.be.

License

The content in this book is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike (CC BY-NC-SA 4.0 https://creativecommons.org/licenses/by-nc-sa/4.0/).


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